Skill

cellxgene-census

Query the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene expression slices, Census summary counts, source H5AD URIs/downloads, embeddings, spatial Census data, or reference atlas comparisons across organisms, tissues, diseases, assays, and cell types. For analyzing your own local single-cell data use scanpy, anndata, or scvi-tools.

Bundled with Research Agent Skills. Its trust score, security findings and other files are on the plugin page.

SKILL.md

Path
skills/cellxgene-census/SKILL.md
Size
12 KB
SHA-256
2385e238de48aeeff466c959d39d684ab9e2277c76b2006c5565390afbe93cb0

Install

Install the plugin's skills with the Skills CLI:

npx [email protected] add KalarisLabs/research-agent-skills